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1.
Nanomedicine ; 57: 102737, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38341010

RESUMO

Brain tumors are one of the most dangerous, because the position of these are in the organ that governs all life processes. Moreover, a lot of brain tumor types were observed, but only one main diagnostic method was used - histopathology, for which preparation of sample was long. Consequently, a new, quicker diagnostic method is needed. In this paper, FT-Raman spectra of brain tissues were analyzed by Principal Component Analysis (PCA), Hierarchical Cluster Analysis (HCA), four different machine learning (ML) algorithms to show possibility of differentiating between glioblastoma G4 and meningiomas, as well as two different types of meningiomas (atypical and angiomatous). Obtained results showed that in meningiomas additional peak around 1503 cm-1 and higher level of amides was noticed in comparison with glioblastoma G4. In the case of meningiomas differentiation, in angiomatous meningiomas tissues lower level of lipids and polysaccharides were visible than in atypical meningiomas. Moreover, PCA analyses showed higher distinction between glioblastoma G4 and meningiomas in the FT-Raman range between 800 cm-1 and 1800 cm-1 and between two types of meningiomas in the range between 2700 cm-1 and 3000 cm-1. Decision trees showed, that the most important peaks to differentiate glioblastoma and meningiomas were at 1151 cm-1 and 2836 cm-1 while for angiomatous and atypical meningiomas - 1514 cm-1 and 2875 cm-1. Furthermore, the accuracy of obtained results for glioblastoma G4 and meningiomas was 88 %, while for meningiomas - 92 %. Consequently, obtained data showed possibility of using FT-Raman spectroscopy in diagnosis of different types of brain tumors.


Assuntos
Neoplasias Encefálicas , Glioblastoma , Neoplasias Meníngeas , Meningioma , Humanos , Meningioma/diagnóstico , Meningioma/patologia , Glioblastoma/diagnóstico , Neoplasias Encefálicas/diagnóstico , Neoplasias Encefálicas/patologia , Análise Multivariada , Análise Espectral Raman/métodos , Análise de Componente Principal , Neoplasias Meníngeas/patologia
2.
Micron ; 179: 103608, 2024 04.
Artigo em Inglês | MEDLINE | ID: mdl-38354449

RESUMO

Research on the structure and chemical composition of dental tissues allows for the optimisation of materials used in the treatment and care of teeth. Understanding pathological processes occurring in dental tissues and their reactions to various substances, including dental materials, are crucial for the development of new dental technologies. The aim of the study was to check the similarities in the chemical and morphological structure of enamel and dentine powders in various groups of permanent teeth, as well as differential chemical analysis for both grinded tissues tested. The extracted non-carious and non-pathological human permanent teeth were divided into four groups: incisors, canines, premolars and molars. Each tooth was sectioned to thick slices. Enamel and dentine were mechanically separated and ground in an agate mortar and pestle. FT-Raman and FTIR spectroscopy methods were used for the analysis of biological tissues. SEM method was applied to visualise hard dental tissues structures present on the surface and within the particles. The morphological structures were the same within the analysed tissues and did not depend on the analysed group of teeth. A comparison of the mineral-to-organic ratios of enamel and dentine in each tooth group showed that the bands related to PO43- were clearly higher in content for enamel than for dentine. Higher absorbance measured at the region of 2800-3700 cm-1 and at 1500-1800 cm-1 for dentine as compared to enamel samples were indicative of a higher content of organic structures. The highest contribution of phosphates was in canine enamel samples.The studies showed that the carbonate-to-phosphate ratio was higher for dentine (0.20 - 0.48) compared to the values obtained for enamel (0.13 - 0.22), however, minor differences were found in each group of enamel or dentine samples. The lack of significant differences between the enamel and dentine powders of incisors, canines, premolars and molars may prove that each extracted tooth, regardless of the tooth group, is an excellent substrate for their substitution.


Assuntos
Dentina , Dente Molar , Humanos , Dentina/química , Esmalte Dentário
3.
J Mol Model ; 29(12): 388, 2023 Nov 29.
Artigo em Inglês | MEDLINE | ID: mdl-38017290

RESUMO

CONTEXT: In this work, the 4-dimethylaminopyridinium-2,4-dinitrophenolate (4DMAP + 2,4DNP) by slow evaporation solution growth method has been presented. The Fourier transform infrared (FT-IR) (4000-400 cm-1) and FT-Raman (4000-50 cm-1) spectra were recorded for the grown crystal. METHODS: The computational calculation has been carried out with density functional theory (DFT) in ground state with Gaussian program package. Optimized geometrical parameters (bond distances, bond angles, and dihedral angles) have been obtained and compared with X-ray crystallography data. The calculated fundamental vibrational frequencies from DFT/B3LYP with 6-311 + + G(d,p) level of theory were scaled so as to agree with the observed results, and the scaling factors were reported. RESULTS: Experimental and computed ultraviolet-visible (UV-Vis) spectra in acetone and methanol solvents were found comparable to each other. Furthermore, the frontier molecular orbitals (FMOs) energies, molecular electrostatic potential (MEP), nonlinear optical (NLO), hirshfeld surface (HS), and global chemical descriptors of the molecule were also calculated. The thermal stability and the melting point of the title compound were analyzed by the thermogravimetric analysis/differential thermal analysis (TGA/DTA) techniques. The mechanical behavior of the organic single crystal was measured by Vickers micro-hardness method. The third-order nonlinear optical properties such as nonlinear refractive index (n2), nonlinear absorption coefficient (ß), optical nonlinear susceptibility Reχ(3), and optical nonlinear susceptibility Imχ(3) were calculated by using the open and closed aperture Z-scan technique. CONCLUSION: The theoretical and experimental NLO values clearly proposed that the nonlinearity of 4DMAP + 2,4DNP molecule could be helped as a potential candidate for optical limiting, frequency doubling, and optical switching applications.

4.
Plants (Basel) ; 12(19)2023 Oct 05.
Artigo em Inglês | MEDLINE | ID: mdl-37836226

RESUMO

This study intended to evaluate the potential industrial applications of various Acacia species (Acacia melanoxylon, Acacia longifolia, Acacia cyclops, Acacia retinodes, Acacia pycnantha, Acacia mearnsii, and Acacia dealbata) by examining their chemical composition, antioxidant, and antimicrobial properties. Using high-resolution mass spectrometry, a comprehensive analysis successfully identified targeted compounds, including flavonoids (flavonols/flavones) and phenolic acids, such as 4-hydroxybenzoic acid, p-coumaric acid, and ellagic acid. Additionally, p-coumaric acid was specifically identified and quantified within the hydroxycinnamic aldehydes. This comprehensive characterization provides valuable insights into the chemical profiles of the studied species. Among the studied species, A. pycnantha exhibited a higher concentration of total phenolic compounds, including catechin, myricetin, quercetin, and coniferaldehyde. Furthermore, A. pycnantha displayed notable antibacterial activity against K. pneumoniae, E. coli, S. Typhimurium, and B. cereus. The identified compounds in Acacia pods and their shown antibacterial activities exhibit promising potential for future applications. Moreover, vibrational spectroscopy was a reliable method for distinguishing between species. These significant findings enhance our understanding of Acacia species and their potential for various industrial applications.

5.
Spectrochim Acta A Mol Biomol Spectrosc ; 303: 123175, 2023 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-37586280

RESUMO

Non-linear optical (NLO) features of 3-[(4-Nitrophenyl Azo)]-9H-Carbazole-9-Ethanol (NPACE) chromophore were investigated by FT-IR, FT-Raman, and UV-visible spectra aided by Density Functional Theory (DFT) using the B3LYP/6-311++G(d,p) basis set of Gaussian 16 W package. It is observed from the DFT calculation that the slight increase in the endocyclic angle of C13 -C14 -C15 and the reduction in exocyclic angle of N40 -N39 -C14 and C15 -C14 -N39 ascertained by experimental XRD values indicating the intramolecular charge-transfer interaction between the carbazole and nitrophenyl group through the diazo bridge. The vibrational contribution to the linear electro-optic effect is 15% of the total hyperpolarizability being calculated at B3LYP/6-311++G (d, p) for the NPACE molecule. It is also observed that the 8a, 19a, and 19b modes of the carbazole ring and the 8a, 8b, and 19b modes of the phenyl ring are found to be simultaneously and intensely active in IR and Raman spectra explaining the charge transfer interactions throughout the molecule. The low value of the HOMO- LUMO energy gap (2.5843 eV) and the deviation between the measured absorption wavelength (3.36 eV) from the computed (3.87 eV), both these facts substantiate the intramolecular charge transfer. The polarizability and first-order hyperpolarizability were calculated as 6.48 × 10-24 and 3.8 × 10-29 esu, respectively. The second harmonic generation (SHG) measurement experiment of NPACE was carried out using the powder method. The SHG efficiency is measured in comparison with the urea standard. The calculated torsional mode at 20 cm-1 is in excellent quantitative agreement with the experimentally determined terahertz absorption peak. The two-photon absorption coefficient of NPACE was estimated to be 0.9 × 10-11 mW-1, which is mainly due to the D-π-A type of molecular structure, and the optical limiting threshold for NPACE was estimated to be 1.52 × 1013 Wm-2 enabling this material as a potential candidate for optical limiting applications.

6.
Poult Sci ; 102(8): 102754, 2023 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-37276701

RESUMO

This study determined the effect of water bath cooking (70°C and 90°C for 40 min) and the extreme heat treatment by an autoclave (121°C for 40 min) on the quality of breast meat of a fast-growing chicken, commercial broiler (CB), and slow-growing chickens, Korat chicken (KC), and Thai native chicken (NC) (Leung Hang Khao), by vibrational spectroscopic techniques, including synchrotron radiation-based Fourier transform infrared (SR-FTIR) microspectroscopy and Fourier transform Raman (FT-Raman) spectroscopy. Taste-enhancing compounds, including inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP), were better retained in cooked KC and NC meats than in cooked CB meat (P < 0.05). The high heat treatment at 121°C depleted the amount of insoluble collagen in all breeds (P < 0.05). Shear force values of slow-growing chicken meat were not affected by high heating temperatures (P > 0.05). In addition, the high heat treatment increased protein carbonyl (P < 0.05), while no effect on in vitro protein digestibility (P > 0.05). SR-FTIR microspectroscopy performed better in differentiating the meat quality of different chicken breeds, whereas FT-Raman spectroscopy clearly revealed differences in meat qualities induced by heating temperature. Based on principal component analysis (PCA), distinct characteristics of chicken meat cooked at 70°C were high water-holding capacity, lightness (L*), moisture content, and predominant α-helix structure, correlating with Raman spectra at 3,217 cm-1 (O-H stretching of water) and 1,651 cm-1 (amide I; α-helix). The high heating temperature at 90°C and 121°C exposed protein structure to a greater extent, as evidenced by an increase in ß-sheets, which was well correlated with the Raman spectra at 2,968 and 2,893 cm-1 (C-H stretching), tryptophan (880 cm-1), tyrosine (858 cm-1), and 1,042, 1,020, and 990 cm-1 (C-C stretching; ß-sheet). SR-FTIR and FT-Raman spectroscopy show potential for differentiation of chicken meat quality with respect to breeds and cooking temperatures. The marked differences in wavenumbers would be beneficial as markers for determining the quality of cooked meats from slow- and fast-growing chickens.


Assuntos
Galinhas , Calefação , Animais , Temperatura , Culinária , Análise Espectral Raman , Água , Colágeno , Carne/análise
7.
Spectrochim Acta A Mol Biomol Spectrosc ; 302: 122997, 2023 Dec 05.
Artigo em Inglês | MEDLINE | ID: mdl-37336191

RESUMO

2,3:4,5-Bis-O-(1-methylethylidene)-beta-D- fructopyranose sulfamate otherwise called as Topiramate is a drug used for the treatment of alcohol dependence. Topiramate is a safe and consistently efficacious medication for treating alcohol dependence. The spectroscopic properties of Topiramate are investigated by Fourier Transform Infrared (FT-IR), Fourier Transform Raman (FT-Raman), Fourier Transform Nuclear magnetic Resonsnce(FT-NMR) andUltra Violet Visible (UV-visible) spectroscopic techniques. The FTIR, FT-Raman, FT-NMR and UV-visible spectra of Topiramate have been recorded and analyzed. Theoretical vibrational frequencies, geometric parameters, thermodynamic properties, Natural population analysis and Mulliken atomic charges of Topiramateare obtained by the Restricted Hartree-Fock (RHF) and density functional theory (DFT) using 6-31 + G(d,p) basis set. The calculated harmonic vibrational frequencies for Topiramate are compared with the experimental values of FTIR and FT-Raman spectra. The observed and the calculated frequencies are found to be in good agreement. Stability of the molecule arising from hyperconjugative interactions and charge delocalization has been analysed using natural bond orbital (NBO) analysis. The first-order hyperpolarizability (ßtot) and other related properties such as dipole moment(µ), polarizability(αo)values of the investigated molecule are computed using HF and DFT/B3LYP with 6-31 + G(d,p) basis set. The calculated results also show that the Topiramate molecule may have microscopic nonlinear optical (NLO) behaviour.

8.
J Biomol Struct Dyn ; 41(3): 982-999, 2023 02.
Artigo em Inglês | MEDLINE | ID: mdl-34913831

RESUMO

Crystals of caffienium bisulfate were grown by solution growth technique. The vibrational spectra were scaled by adopting FT-IR and FT-Raman spectroscopy with the wide range, between 4000-400 cm-1. X-ray diffraction study exhibited that the functional group such as N-H….O hydrogen bonds played an effective role in generating hydrogen-bonded crystal packing, pre-dominant. The examined molecules showed an interconnection of anions, by the O-H…O hydrogen bonds, establishing a chain C (4) motif, extending along the b-axis of the unit cell. Further, anions have shown interaction with cations, through N-H…O hydrogen bond, resulting from a ring R12 (4) motif. The formed ring and chain motifs manifested an alternate hydrophilic stratum at z = » and ¾. Geometrical optimization of tester molecule was done with Density Functional Theory (DFT) employing B3LYP function along with Hartree-Fock (HF) using 6-311++G(d,p) level basis set. Optimum molecular geometry and calculated database on the vibrational spectra were critically analyzed by comparing with experimental findings, resulting in a good correlating exhibited among them. Natural Bond Orbital (NBO) study revealed that hyper conjugation affinities and intermolecular charge transfer (ICT). An advanced technique such as HOMO-LUMO plot was performed to understand the chemical hardness, electro negativity and chemical efficacy of the tested molecules. The results showed that the occurrence of lower band gap value in the frontier orbital was responsible for the possible biological activities of the study materials. Bioinformatics analysis is applied for analyzing the biological activity of CAFSUL against Alzheimer's disease through computational methods.Communicated by Ramaswamy H. Sarma.


Assuntos
Teoria Quântica , Análise Espectral Raman , Modelos Moleculares , Conformação Molecular , Cristalização , Espectroscopia de Infravermelho com Transformada de Fourier , Termodinâmica , Vibração
9.
Heliyon ; 8(8): e10122, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-36039137

RESUMO

Isorhapontigenin (IRPG) drug emerges as promising efficient inhibitor for H1N1 and H3N2 subtypes which belong to influenza A virus; reported with IC50 value of 35.62 and 63.50 µM respectively. When experimental data are compared to the predicted geometrical parameters and vibrational assignments (FT-IR and FT-Raman), the findings indicated a strong correlation. The absorption bands of π→π∗ transitions are revealed through UV-Vis electronic properties; this confirms that the IRPG molecule shows strong bands. Through NBO and HOMO-LUMO analysis, the kinetic stability and chemical reactivity of the IRPG molecule were investigated. By using an MEP map, the IRPG's electrophilic and nucleophilic site selectivity was assessed. In a molecular docking investigation, the IRPG molecule shows a stronger inhibition constant and binding affinity for the H1N1 and H3N2 influenza virus. The IRPG molecule thus reveals good biological actions in nature and can be used as a potential therapeutic drug candidate for H1N1 and H3N2 virus A influenza.

10.
Molecules ; 27(14)2022 Jul 11.
Artigo em Inglês | MEDLINE | ID: mdl-35889313

RESUMO

In several of his artworks, for instance the Venezie cycle, Fontana employed metallic paints; previous investigations on such materials highlighted the use of different synthetic binders and of thick paint layers below the metal one, having different colours to change the visual perception of the metallic surface. In the present work, a monochrome silver "Concetto spaziale" by the Italo-Argentine artist belonging to a private collection recently gifted to the museum of the Church of San Fedele in Milano, Italy, was investigated to deepen the knowledge of this particular group of Fontana's paintings. The artwork was initially visually inspected in visible and ultraviolet (UV) light. Subsequently, a non-invasive spectroscopic investigation was performed by X-ray fluorescence (XRF), reflection Fourier-transform infrared (FTIR) and Raman spectroscopy. A minute fragment of silver-coloured paint was taken from the reverse of the painting, near the cut edge, and examined by scanning electron microscopy coupled with energy dispersive X-ray analysis (SEM-EDX) and micro-Fourier-transform Raman (FT-Raman) spectroscopy. The analytical data made it possible to identify the composition of the metallic paint layer and of the underlying dark one, both from the point of view of the pigments and of the binders used, also highlighting the potential of the non-invasive and micro-invasive methods adopted in the investigation.


Assuntos
Pinturas , Prata , Pintura , Análise Espectral Raman , Raios X
11.
Food Chem ; 393: 133430, 2022 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-35696953

RESUMO

Flavonoids are secondary metabolites commonly found in plants. They are known for their antioxidant properties, are part of the defense mechanisms of plants and are responsible for the pigmentation of fruit and flowers petals. Consumption foods rich in flavonoids in the daily diet brings a number of pro-health benefits - for example blood pressure regulation, delaying the aging process or anti-cancer effect. These compounds in synthetic or natural form are also used in pharmacy. The profile of flavonoid compounds can be quickly, accurately and easy determine in the test sample by using the infrared and Raman spectroscopy. Those methods are successfully used in the food and pharmaceutical industries. Spectroscopy methods allow us to determine the chemical structure of these compounds. This review describes and compares differences between the spectroscopic spectra of individual compounds with the chemical structure for the flavonoids subgroups: flavones, isoflavones, flavanones, flavonols and anthocyanins.


Assuntos
Flavonoides , Análise Espectral Raman , Antocianinas , Antioxidantes/química , Flavonoides/química , Espectroscopia de Infravermelho com Transformada de Fourier
12.
Molecules ; 27(11)2022 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-35684420

RESUMO

Bio-based nanoemulsions are part of green pest management for sustainable agriculture. This study assessed the physicochemical properties and the herbicidal activities of the peppermint essential oil nanoemulsions (PNs) in concentrations 1.0-10% stabilized by Eco-Polysorbate 80 on germinating seeds and young plants of maize and barnyard grass. Based on the design of experiment (DOE) results, the final nanoemulsion formulations were obtained with 1, 1.5, 2, and 5% of essential oil concentration. Biological analyses were conducted to select the most promising sample for selective control of barnyard grass in maize. Seedlings growing in the presence of PNs displayed an overall inhibition of metabolism, as expressed by the calorimetric analyses, which could result from significant differences in both content and composition of carbohydrates. Concentration-response sub estimation showed that leaf-sprayed concentration of PN causing 10% of maize damage is equal to 2.2%, whereas doses causing 50% and 90% of barnyard grass damage are 1.1% and 1.7%, respectively. Plants sprayed with PN at 5% or 10% concentration caused significant drops in relative water content in leaves and Chlorophyll a fluorescence 72 h after spraying. In summary, peppermint nanoemulsion with Eco-Polysorbate 80 at 2% concentration is a perspective preparation for selective control of barnyard grass in maize. It should be analyzed further in controlled and field conditions.


Assuntos
Echinochloa , Herbicidas , Óleos Voláteis , Clorofila A , Herbicidas/farmacologia , Mentha piperita , Óleos Voláteis/farmacologia , Óleos de Plantas , Plantas , Polissorbatos , Zea mays
13.
Food Chem ; 389: 133109, 2022 Sep 30.
Artigo em Inglês | MEDLINE | ID: mdl-35504071

RESUMO

Effect of overmixing process and structure of selected phenolic acids belonging to hydroxycinnamic and hydroxybenzoic group on the structure of gluten network were analysed with application of FT-Raman Spectroscopy. Modification of gluten by acids resulted in formation of aggregates and unordered structures at the expense of protein stabilizing structures (e.g. ß-sheets or ß-turns). Supplementation with most of the acids caused reduction in the amount of disulphide bonds in the most stable conformation (g-g-g). Changes in the molecular organization of gluten proteins depended on the chemical structure of particular acids. The presence of bands assigned to aggregates was connected with the number of OH groups present at the aromatic ring of the acids. Acids belonging to hydroxycinnamic group did not incorporate or incorporate only partially into gluten network by formation of covalent or hydrogen bonds. Spectrophotometric analysis showed that hydroxycinnamic acids can interact stronger with gluten proteins compared to hydroxybenzoic acids.


Assuntos
Glutens , Triticum , Glutens/química , Hidroxibenzoatos , Conformação Proteica em Folha beta , Análise Espectral Raman/métodos , Triticum/química
14.
Spectrochim Acta A Mol Biomol Spectrosc ; 279: 121417, 2022 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-35636141

RESUMO

An analysis of FT-Raman spectra of quinidine (C20H24N2O2) aqueous solutions with varying pH (which was regarded as an external perturbation) was performed using the 2D correlation method. The main course of changes in the quinidine solution appears to be: protonation changes of the quinuclidine nitrogen N1, followed by protonation changes of nitrogen N13 in the quinoline, leading to the appearance of cross-peaks in the synchronous and asynchronous correlation maps. The intensity changes of peaks at 1369 cm-1 for the unprotonated quinidine molecule, and characteristic peaks at 1387 cm-1 and 1389 cm-1 for protonated quinuclidine and double protonated quinidine, respectively, along with the decrease in pH, confirmed that the change in the pH of the quinidine solution has an influence on the protonation process of the Cinchona alkaloid. The negative synchronous and asynchronous cross-peaks at (1385, 823) cm-1 and (1387, 822) cm-1, respectively, indicate the importance of remodeling the quinoline fragment, during the process of a double protonation of the quinidine molecule. Bands correlating with 2809 cm-1 confirmed the importance of the methoxy group in the process of quinidine protonation. The creation of hydrogen bonds after double protonation of the Cinchona alkaloids, assisted by the CH3-O group, give an interesting insight into the changes in the studied compound occurring along with a decrease in pH.


Assuntos
Alcaloides de Cinchona , Quinolinas , Alcaloides de Cinchona/química , Ligação de Hidrogênio , Concentração de Íons de Hidrogênio , Quinidina/química
15.
Molecules ; 27(10)2022 May 11.
Artigo em Inglês | MEDLINE | ID: mdl-35630570

RESUMO

Although the health benefits of cornflower extracts are known, their application in food production has not been widely investigated. This study assessed microencapsulated red powders (RP) prepared from the aqueous extract of blue cornflower petals. Microencapsulation was performed by freeze-drying using various stabilizers, such as maltodextrin, guar gum, and lecithin. The microencapsulated RP were characterized by spectral (FT-IR and FT-Raman), mineral, structural, and antioxidant analyses. The FT-IR and FT-Raman band related to guar gum, lecithin, and maltodextrin dominated over the band characteristic of anthocyanins present in the cornflower petal powders. The main difference observed in the FT-Raman spectra was attributed to a shift of bands which is reflection of appearance of flavium cation forms of anthocyanins. The microencapsulated RP had total phenolic content of 21.6-23.4 mg GAE/g DW and total flavonoid content of 5.0-5.23 mg QE/g. The ABTS radical scavenging activity of the tested powders ranged from 13.8 to 20.2 EC50 mg DW/mL. The reducing antioxidant power (RED) of the powders was estimated at between 31.0 and 38.7 EC50 mg DW/mL, and OH• scavenging activity ranged from 1.9 to 2.6 EC50 mg DW/mL. Microencapsulated cornflower RP can be valuable additives to food such as sweets, jellies, puddings, drinks, or dietary supplements.


Assuntos
Antocianinas , Antioxidantes , Antocianinas/química , Antioxidantes/química , Lecitinas , Pós , Espectroscopia de Infravermelho com Transformada de Fourier
16.
Mater Today Proc ; 50: 2816-2825, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-33173755

RESUMO

Theoretical investigations on the molecular geometry, vibrational and electronic environment of (2E)-1-(4-aminophenyl)-3-(4-benzyloxyphenyl)-prop-2-en-1-one (APBPP) are presented for the first time. The vibration frequencies simulated were thoroughly analysed employing DFT/B3LYP using 6-311++G(d,p) basis set and compared with experimental FT- Raman and FT- IR data which showed good agreement vice-versa. Optimised molecular equilibrium geometry of the title compound was carried out. Vibrational assignments of wave numbers with PED (potential energy distribution) was done using VEDA software and the quantum chemical calculations of the molecular geometry were scaled using quantum mechanics. The title molecule showcased excellent results on HOMO - LUMO energies, NMR chemical shifts, 3.73 eV band gap, electronegativity (χ), chemical potential (µ), softness (S), global hardness (η). The low softness value (0.261) and thehigh value of electrophilicity index (4.0323) explains the biological activity of the title molecule. The reactive sites of APBPP were thoroughly investigated by Mulliken charges, MEP (Molecular electrostatic Potential) and Fukui functions. Thermo dynamical environment of the title compound for different temperatures were studied which reveals the correlations between entropy (S), heat capacity (C) and enthalpy changes (H) with temperatures. The title compound was docked into the reactive sites of antiviral (SARS-CoV-1,2) and anticancer protein using molecular docking tool and it showed excellent results compared to the ongoing clinical trials. The paper explains the experimental analysis which are in line with the quantum calculations and presents an optimistic evidence via Molecular docking studies. The synthesized compound against various panels of microorganism projects its ability to be the most potential drug to treat various pathologies in pharmacy Industry.

17.
Environ Res ; 203: 111913, 2022 01.
Artigo em Inglês | MEDLINE | ID: mdl-34425112

RESUMO

The issue of effluent, especially organic colorants from several manufacturing units overlays an immense delinquent of the current epoch owing to its effect on oncogenic health hazards. Thus, Rare Earth Metal dysprosium (Dy) doped Zinc Ferrite (ZnFe2O4) were as-synthesized by a facile co-precipitation technique as an effectual nano photocatalyst intended to the amputation of these noxious dyes. The structural, functional, optical, magnetic, and degradation properties of this RE (Dy3+) doped ions were investigated using various characterizations, such as crystallite size (D) and several parameters (cation distribution, oxygen positional parameters, and bond length) were determined using XRD (X-ray diffraction) and it was found that as the dy3+ ion concentration increases the speck size decreased and the grain size remained within nano regime, which intern affects the surface area. From BET analysis it was found that on increasing the doping concentration, the surface area increases which pave a substantial role in the photo-Fenton activity. By using FT-IR (Fourier-transform infrared spectroscopy) various functional parameters (elastic, interionic bonds, ion distribution, etc.) were determined. Raman spectra had no extra peak formation which is seen to have pure phase formation of the as-synthesized samples. HR-TEM (High-Resolution Transmission Electron Microscopy analysis were done to determine the nature of the sample, the as-synthesized magnetic samples exhibit a polycrystalline formation with cubical agglomeration. The magnetic property was very significant for x = 0.10 concentration. As-synthesized (Fe0.9064Zn0.0936) [Fe1.0936Dy0.1Zn0.8064] O4) exhibits a momentous photo - Fenton activity against MB (Methylene blue), its removal efficiency was found to be 97.3% after 45 min. Also, this spinel ferrite acts as a magnetic recyclable catalyst even after 5 cycles with an insignificant lessening of elements and photo-Fenton activity.


Assuntos
Poluentes Ambientais , Nanopartículas , Disprósio , Compostos Férricos , Espectroscopia de Infravermelho com Transformada de Fourier , Zinco
18.
J Biomol Struct Dyn ; 40(20): 9962-9973, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-34143950

RESUMO

This investigation involved oxalate salt of B vitamin experimental and theoretical spectra analysis. Docking studies and molecular dynamic simulation analysis were also carried out against the target protein involved in prostate cancer. At room temperature, the infra-red and Raman spectra results were chronicled in at range 4000-400 cm-1. In the crystalline environment along with the shifting of some spectral bands, the effect of hydrogen bonding force is detected. HF and DFT/B3LYP were employed to estimate the optimized geometry with the basis set of 6-311++G (d,p). Hypothetical wavenumbers presented a respectable agreement with the investigational values. The various genuine modes are observed and some of them are perceived in the experimentally observed spectra. Hyperconjugative interaction and intramolecular charge transfer (ICT) values were calculated with the help of the natural bond orbital (NBO) study. HOMO-LUMO plot technique was employed to examine the compound's hardness of chemical, chemical potential, and electro-negativity. The molecules' bioactivity and therapeutic efficacy were estimated through the lower band gap value of the frontier orbitals. In silico analysis was performed, to analyse the therapeutic efficacy of oxalate complex of Nicotinamide against Prostate cancer through Molecular docking and dynamics study. ADME/T analysis revealed the pharmaceutical efficacy of the oxalate complex of Nicotinamide by satisfying Lipinski's Rule of Five, BBB, HOA, etc.Highlights of the workComparative studies of theoretical and experimental vibrational spectra of the B vitaminTheoretical wavenumber numbers were showed good agreement with the experimental valuesTheoretical bond lengths and bond angles were slightly deviated from the experimental valuesTheoretical calculations shows that B vitamin exists in a CocrystalNumber of modes calculated from the factor group method is match with the theoretical method.


Assuntos
Neoplasias da Próstata , Complexo Vitamínico B , Masculino , Humanos , Teoria Quântica , Modelos Moleculares , Análise Espectral Raman , Niacinamida , Oxalatos , Espectroscopia de Infravermelho com Transformada de Fourier , Simulação de Acoplamento Molecular , Vibração , Neoplasias da Próstata/tratamento farmacológico , Termodinâmica
19.
J Mol Model ; 28(1): 5, 2021 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-34889990

RESUMO

Dihydropyridines are the most extensively used drugs in the treatment of hypertension. Nifedipine is the prototype of calcium channel blocker. The dihydropyridine derivative compounds of diethyl 4-(4-bromophenyl)-2,6-dimethyl-1,4-dihydropyridine-3,5-dicarboxylate (DHPB), diethyl 4-(furan-2yl)-2,6-dimethyl-1,4-dihydropyridine-3,5-dicarboxylate (DHPF), and diethyl-4-phenyl-2,6-dimethyl-1,4-dihydropyridine-3,5-dicarboxylate (DHPP) were synthesized using the Hantzsch reaction. The DFT/B3LYP exchange-correlation function was employed to perform quantum chemical calculations such as molecular geometry optimization, vibrational analysis, frontier molecular orbital (FMO), molecular electrostatic potential (MEP), natural bond order (NBO), global reactive descriptors, and Fukui functions to determine the structural characteristics related to biological activity of the compounds. The molecular docking and molecular dynamics were employed to study the binding interaction and stability of protein-ligand complex in the docked site.


Assuntos
Bloqueadores dos Canais de Cálcio/química , Bloqueadores dos Canais de Cálcio/farmacologia , Di-Hidropiridinas/química , Di-Hidropiridinas/farmacologia , Bloqueadores dos Canais de Cálcio/síntese química , Técnicas de Química Sintética , Teoria da Densidade Funcional , Di-Hidropiridinas/síntese química , Ligantes , Simulação de Acoplamento Molecular , Estrutura Molecular , Análise Espectral , Relação Estrutura-Atividade
20.
J Mol Model ; 27(9): 266, 2021 Aug 28.
Artigo em Inglês | MEDLINE | ID: mdl-34453612

RESUMO

The present work explores the structural parameters and vibrational frequencies as well as molecular interactions of benzodiazepine derivatives, such as clothiapine (CT), clozapine (CZ), and loxapine (LX). Employing fitting experimental data to theoretical results is used to assess the structural parameters of heading composites. The main assignment is passed out according to the overall distribution of energy of the vibrational modes. From the hyper-conjugative interaction, the permanency of the structure had been predicted through natural bond orbital analysis; it is also used to identify the bonding and antibonding regions of the molecules. Moreover, electrostatic potential (ESP), density of states (DOS), and charge transfer occurring of the molecule among HOMO as well as LUMO energy were calculated and presented; utilizing electron localized field (ELF), localized orbital locator (LOL), and reduced density gradient (RDG), the chemical interactive regions are found. Additionally, mean polarizability (αtot), the first-order hyperpolarizability (ßtot), and softness and hardness of the entitled compounds were also performed. The interaction between protein-ligand was also predicted by docking studies.


Assuntos
Benzodiazepinas/química , Química Computacional , Modelos Moleculares , Simulação de Acoplamento Molecular , Espectroscopia de Infravermelho com Transformada de Fourier , Eletricidade Estática , Vibração
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